Index: sites/all/modules/filter_perms/filter_perms.module
IDEA additional info:
Subsystem: com.intellij.openapi.diff.impl.patch.CharsetEP
<+>UTF-8
===================================================================
--- sites/all/modules/filter_perms/filter_perms.module	(revision 5976f939de78d6a851d340a9906c4c36616c4da8)
+++ sites/all/modules/filter_perms/filter_perms.module	(revision )
@@ -87,14 +87,18 @@
     foreach ($perms as $perm_key => $perm) {
 
       foreach ($perms[$perm_key] as $perm_name => $perm_value) {
+        foreach ($new_roles as $rid => $role) {
+          if ((in_array($perm_name,$old_checkboxes[$rid]['#default_value']) && isset($_SESSION['filter_perm_enabled']) && ($_SESSION['filter_perm_enabled'] ==1 ))
+              || (isset($_SESSION['filter_perm_enabled']) && ($_SESSION['filter_perm_enabled'] ==0)) ) {
+          #ToDo find a cleaner solution because $form['permission'] redundant setup
-        $form['permission'][$perm_index] = $old_perms[$perm_value];
-        $form['permission'][$perm_name] = $old_perms[$perm_name];
+          $form['permission'][$perm_index] = $old_perms[$perm_value];
+          $form['permission'][$perm_name] = $old_perms[$perm_name];
-        foreach ($new_roles as $rid => $role) {
           $form['checkboxes'][$rid]['#type'] = 'checkboxes';
           $form['checkboxes'][$rid]['#options'][$perm_name] = '';
           $form['checkboxes'][$rid]['#default_value'] = $old_checkboxes[$rid]['#default_value'];
-        }
-      }
+          }
+        }
+      }
       $perm_index++;
     }
     $form['role_names'] = $new_roles;
@@ -168,6 +172,11 @@
     '#collapsible' => TRUE,
     '#collapsed' => FALSE,
   );
+   $form['filters']['enabled']=array(
+        '#type' => 'checkbox',
+        '#title' => t('Enabled only permissions'),
+        '#default_value' => isset($_SESSION['filter_perm_enabled']) ? $_SESSION['filter_perm_enabled'] : '',
+  );
   $role_options = user_roles();
   // Displays all user roles.
   $form['filters']['roles'] = array(
@@ -205,4 +214,5 @@
 function filter_perms_admin_perm_filter_submit($form, &$form_state) {
   $_SESSION['filter_perm_roles'] = $form_state['values']['roles'];
   $_SESSION['filter_perm_modules'] = $form_state['values']['modules'];
+  $_SESSION['filter_perm_enabled'] = $form_state['values']['enabled'];
 }